Emre ERMISOGLU, M.S.
Emre Ermisoglu is an Applications Systems Analyst / Programmer at University of Arkansas for Medical Sciences(UAMS). Emre has a Bacholor's degree in 'Computer Science And Engineering' from Sabanci University,Turkey. Also He has Master's degree in 'Computer Science' and 'Bioinformatics' from University of Arkansas at Little Rock (UALR), USA. He is currently pursuing a PhD degree in Bioinformatics.
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EDUCATION
Doctor of Philosophy
Master of Science
Master of Science
Bachelor of Science
Present
University Of Arkansas, Little Rock
Major: Bioinformatics
December 2015
University Of Arkansas, Little Rock
Major: Bioinformatics
Advisor: Dr. Mary YANG
May 2011
University Of Arkansas, Little Rock
Major: Computer Science
Advisor: Dr. Coskun BAYRAK
January 2008
Sabanci University, Turkey
Major: Computer Science and Engineering
WORK EXPERIENCE
Research Systems Analyst - Senior
Research System Analyst
Applications Systems Analyst/Programmer
Research Assistant
Summer Internship
July 2019 - Present
IT Research Department in UAMS
June 2016 - June 2019
IT Research Department in UAMS
February 2011 - May 2016
IT Research Department in UAMS
Spring 2009 - Fall 2010
Computer Science Department in UALR
Summer 2007
Internship in UALR
RESEARCH
Conference Paper
E.Ermisoglu,F.Sen,S.Kockara,T.Halic,C.Bayrak,R.Rowe, 'A Scooping Simulation Framework for Artificial Cervical Disk Replacement Surgery', 2009 IEEE International Conference on Systems, Man, and Cybernetics,SMC 2009.
E. Ermisoglu, C. Bayrak,E. Mendi, 'Simulation of Mobile Treatment Monitoring System',International Symposium on Network Enabled Health Informatics, Biomedicine and Bioinformatics (HI-BI-BI 2013), in conjunction with IEEE/ACM International Conference on Advances in Social Networks Analysis and Mining (ASONAM 2013),Niagara Falls, Canada, August 25-28, 2013. (accepted: July 2, 2013)
Y. Zhang, E. Ermisoglu, D. Li, D. Geisert, W. Yang, K. Yoshigoe, C. Haydan, and M. Yang, "Building Genomics Foundation for Precision Medicine Research: A portable multitask data management system," Proceedings of the 3rd International Conference on Advances in Big Data Analytics, 2016. [PDF]
Journal Paper
E. Mendi, S. Cecen, E. Ermisoglu, C. Bayrak, Automated Neurosurgical Video Segmentation and Retrieval System, Journal of Biomedical Science and Engineering, 2010.
E. Mendi, C. Bayrak,S. Cecen, E. Ermisoglu, 'Content-Based Management Service for Medical Videos', Telemedicine and e-Health, Vol. 19 No.1 ,36-41, 2013.
Lencioni A, Hutchins L, Annis S, Chen W, Ermisoglu E, Feng Z, Mack K, Simpson K, Lane C, Topaloglu U. An Adverse Event Capture and Management System for Cancer Studies. BMC bioinformatics. 2015; 16 Suppl 14:S6.
Poster
U. Topaloglu, J. Bian, Z. Feng, E. Ermisoglu, J. Perez, C. Lane, W. Hogan (2012,November) Implementing an Enterprise Service Bus for the UAMS Comprehensive Research Informatics Suite, Poster session presented at the 2012 CTSA Annual Informatics Meeting, Northwestern University
E. Ermisoglu,R. Avci, T. Hahn (2014, February) Multiple Sequence Alignment Tool, Poster session presented at the 2014 MCBIOS, Oklahoma State University
E. Ermisoglu,M. Yang, D. Li (2015, March) NGS Data Management Framework, Poster session presented at the 2015 MCBIOS, Little Rock
E. Ermisoglu, S. Kockara, D. Chittajallu, T. Halic, H. Wong (2019, March) Content Based Dermoscopic Image Retrieval for Diagnostic Decision Support, Poster session presented at the 2019 MCBIOS, University of Alabama
PROJECTS
CERTIFICATION
Johns Hopkins University
Johns Hopkins University
Johns Hopkins University
November 2014
Getting and Cleaning Data
Coursera verified certificate. License : ZCWEGPFD9P
September 2014
The Data Scientist’s Toolbox
Coursera verified certificate. License : 4PSW2A5237
September 2014
R Programming
Coursera verified certificate. License : 5YHLYZFQKS
ACCOMPLISHMENT & AWARDS
Outstanding Master's Student Award
Imagine Cup US Finalist
Scholarship
2011
Student Award,USA
UALR Department of Computer Science Outstanding Master’s Student Award
For the 2010-2011 Academic Year.
For the 2010-2011 Academic Year.
2009
Microsoft Imagine Cup, USA
September 2002
SU Merit Scholarship TURKEY
For ranking 3150th Scholarship , out of 1.5 million test takers in the National University Entrance Exam.